Maenifold Tools
26 MCP tools for persistent knowledge management, graph operations, and AI orchestration.
AddMissingH1
One-time migration tool prepending `# {title}` headers to legacy memory files lacking top-level H1. Ensures consistent markdown structure for rendering and graph integration. Idempotent with dry-run preview.
Adopt
Loads , , or JSON configuration from `~/maenifold/assets/` to enable specialized thinking modes.
AnalyzeConceptCorruption
⚠️ **MUST USE BEFORE RepairConcepts.** Read-only diagnostic revealing `` families and variants for safe consolidation planning.
AssumptionLedger
Declare, update, and track assumptions without auto-inference. Stores as markdown in `memory://assumptions/` with `` integration.
BuildContext
Traverses concept relationships via multi-hop graph queries.
DeleteMemory
Permanently removes memory files from disk with confirmation safety.
EditMemory
Modifies existing memory files with preservation and checksum safety for graph integrity.
ExtractConceptsFromFile
Extracts `` concepts from memory files to analyze graph nodes before synchronization.
FindSimilarConcepts
Discovers semantically similar concepts using 384-dimensional vector embeddings and cosine similarity.
GetConfig
Returns Ma Core system configuration for debugging and troubleshooting.
GetHelp
Loads complete tool documentation from `~/maenifold/assets/usage/tools/{toolname}.md` for detailed usage guidance.
ListMemories
Explores memory system folder structure with file counts and sizes for navigation and organization planning.
ListWorkflows (DEPRECATED)
**Removed.** Use MCP resource tools.
MemoryStatus
Returns system statistics: file counts, graph metrics, storage usage.
MoveMemory
Relocates/renames knowledge files in `~/maenifold/memory/` while preserving `` and updating metadata timestamps.
ReadMemory
Retrieves content from `~/maenifold/memory/` files by URI or title with checksum for safe editing.
RecentActivity
Monitors system activity with time-based filtering for memory files and thinking sessions.
RepairConcepts
Repairs graph corruption by replacing `` variants with canonical form in source markdown files. **DANGER: Permanently modifies files.**
RunFullBenchmark
Validates Ma Core performance claims: GRPH-009 CTE vs N+1, search latency, sync timing, complex traversal bottlenecks.
SearchMemories
Full-text content search across `~/maenifold/memory/` with scoring, snippets, and flexible filtering.
SequentialThinking
Test-time adaptive reasoning with revision, branching, and multi-agent collaboration. Persists to `memory://thinking/sequential/{session-id}`.
Sync
Rebuilds knowledge graph from all `` concepts in memory files. Extracts concepts, builds co-occurrence relationships, updates search indices.
UpdateAssets
Refreshes `~/maenifold/assets/` from packaged assets after maenifold upgrades.
Visualize
Generates Mermaid diagrams of concept relationships from `~/maenifold/memory.db` graph database.
Workflow
Orchestrates systematic problem-solving through predefined methodologies with embedded sequential thinking.
WriteMemory
Creates knowledge files in `~/maenifold/memory/` with automatic graph integration via `` concepts.
About These Tools
Maenifold provides a comprehensive toolkit for knowledge graph operations, semantic search, concept repair, and complex reasoning workflows.
Each tool is available as an MCP (Model Context Protocol) server and can be integrated into your Claude projects, Continue IDE extensions, and Cline workflows.